Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Best1O88870 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.89■□□□□ 0.13
Best1O88870 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.88■□□□□ 0.13
Best1O88870 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Best1O88870 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.88■□□□□ 0.13
Best1O88870 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.88■□□□□ 0.13
Best1O88870 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.88■□□□□ 0.13
Best1O88870 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.88■□□□□ 0.13
Best1O88870 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Best1O88870 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Best1O88870 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.87■□□□□ 0.13
Best1O88870 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Best1O88870 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Best1O88870 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.87■□□□□ 0.13
Best1O88870 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Best1O88870 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Best1O88870 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Best1O88870 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.86■□□□□ 0.13
Best1O88870 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Best1O88870 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Gm24589-201ENSMUST00000116692 94 ntBASIC15.86■□□□□ 0.13
Best1O88870 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.86■□□□□ 0.13
Best1O88870 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Best1O88870 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Best1O88870 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Best1O88870 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Best1O88870 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Gm15165-201ENSMUST00000118140 502 ntBASIC15.85■□□□□ 0.13
Best1O88870 Gm27459-201ENSMUST00000184860 107 ntBASIC15.85■□□□□ 0.13
Best1O88870 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.85■□□□□ 0.13
Best1O88870 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Best1O88870 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Best1O88870 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Best1O88870 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.84■□□□□ 0.13
Best1O88870 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.84■□□□□ 0.13
Best1O88870 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.84■□□□□ 0.13
Best1O88870 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Best1O88870 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Best1O88870 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms