Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.91■□□□□ 0.3
ShdO88834 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ShdO88834 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ShdO88834 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.91■□□□□ 0.3
ShdO88834 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ShdO88834 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ShdO88834 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
ShdO88834 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShdO88834 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ShdO88834 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ShdO88834 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.9■□□□□ 0.3
ShdO88834 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ShdO88834 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
ShdO88834 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.9■□□□□ 0.3
ShdO88834 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShdO88834 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.89■□□□□ 0.3
ShdO88834 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
ShdO88834 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.89■□□□□ 0.3
ShdO88834 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ShdO88834 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
ShdO88834 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
ShdO88834 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ShdO88834 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Gm11336-201ENSMUST00000118168 334 ntBASIC16.89■□□□□ 0.29
ShdO88834 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.89■□□□□ 0.29
ShdO88834 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Gm22697-201ENSMUST00000175194 63 ntBASIC16.89■□□□□ 0.29
ShdO88834 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ShdO88834 Gm18032-201ENSMUST00000222541 538 ntBASIC16.89■□□□□ 0.29
ShdO88834 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ShdO88834 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.89■□□□□ 0.29
ShdO88834 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ShdO88834 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShdO88834 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.88■□□□□ 0.29
ShdO88834 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ShdO88834 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.88■□□□□ 0.29
ShdO88834 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.88■□□□□ 0.29
ShdO88834 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ShdO88834 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShdO88834 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms