Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldn1O88551 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn1O88551 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn1O88551 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.16□□□□□ -0.14
Cldn1O88551 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cldn1O88551 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn1O88551 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.16□□□□□ -0.14
Cldn1O88551 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn1O88551 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn1O88551 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn1O88551 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn1O88551 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cldn1O88551 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn1O88551 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Cldn1O88551 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn1O88551 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cldn1O88551 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Gm12644-201ENSMUST00000119935 606 ntBASIC14.15□□□□□ -0.14
Cldn1O88551 Gm1401-201ENSMUST00000122048 772 ntBASIC14.15□□□□□ -0.14
Cldn1O88551 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.15□□□□□ -0.14
Cldn1O88551 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Rps4l-201ENSMUST00000071745 943 ntBASIC14.15□□□□□ -0.14
Cldn1O88551 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cldn1O88551 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cldn1O88551 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn1O88551 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn1O88551 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Cldn1O88551 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Cldn1O88551 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Cldn1O88551 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldn1O88551 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cldn1O88551 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Gm11336-201ENSMUST00000118168 334 ntBASIC14.14□□□□□ -0.15
Cldn1O88551 Gm15372-201ENSMUST00000120729 834 ntBASIC14.14□□□□□ -0.15
Cldn1O88551 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.14□□□□□ -0.15
Cldn1O88551 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.14□□□□□ -0.15
Cldn1O88551 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn1O88551 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldn1O88551 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldn1O88551 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn1O88551 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn1O88551 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn1O88551 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn1O88551 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn1O88551 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cldn1O88551 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms