Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.28■□□□□ 0.36
Ttc3O88196 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.28■□□□□ 0.36
Ttc3O88196 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.28■□□□□ 0.36
Ttc3O88196 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ttc3O88196 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.28■□□□□ 0.36
Ttc3O88196 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ttc3O88196 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.27■□□□□ 0.36
Ttc3O88196 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ttc3O88196 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.27■□□□□ 0.36
Ttc3O88196 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.27■□□□□ 0.36
Ttc3O88196 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ttc3O88196 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ttc3O88196 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Ttc3O88196 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Ttc3O88196 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ttc3O88196 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ttc3O88196 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ttc3O88196 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ttc3O88196 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ttc3O88196 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Gm4459-201ENSMUST00000118750 468 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ttc3O88196 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Gm13036-201ENSMUST00000117799 748 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Gm12497-201ENSMUST00000138778 237 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.26■□□□□ 0.35
Ttc3O88196 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.26■□□□□ 0.35
Ttc3O88196 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.26■□□□□ 0.35
Ttc3O88196 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ttc3O88196 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.26■□□□□ 0.35
Ttc3O88196 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ttc3O88196 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ttc3O88196 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.25■□□□□ 0.35
Ttc3O88196 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.25■□□□□ 0.35
Ttc3O88196 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ttc3O88196 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ttc3O88196 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ttc3O88196 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.24■□□□□ 0.35
Ttc3O88196 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ttc3O88196 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ttc3O88196 Gm25406-201ENSMUST00000157599 105 ntBASIC17.24■□□□□ 0.35
Ttc3O88196 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.24■□□□□ 0.35
Ttc3O88196 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ttc3O88196 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ttc3O88196 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ttc3O88196 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms