Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Stra6O70491 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.23■□□□□ 0.51
Stra6O70491 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.23■□□□□ 0.51
Stra6O70491 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Gm6376-201ENSMUST00000209407 580 ntBASIC18.23■□□□□ 0.51
Stra6O70491 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stra6O70491 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Rps4l-201ENSMUST00000071745 943 ntBASIC18.23■□□□□ 0.51
Stra6O70491 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Stra6O70491 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra6O70491 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Stra6O70491 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Gm43514-201ENSMUST00000198852 424 ntBASIC18.22■□□□□ 0.51
Stra6O70491 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.22■□□□□ 0.51
Stra6O70491 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Stra6O70491 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Stra6O70491 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Stra6O70491 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra6O70491 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra6O70491 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra6O70491 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra6O70491 Gm7862-201ENSMUST00000121461 292 ntBASIC18.21■□□□□ 0.51
Stra6O70491 Gm18733-201ENSMUST00000173950 856 ntBASIC18.21■□□□□ 0.51
Stra6O70491 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.21■□□□□ 0.51
Stra6O70491 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.21■□□□□ 0.51
Stra6O70491 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.21■□□□□ 0.51
Stra6O70491 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra6O70491 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stra6O70491 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Stra6O70491 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Stra6O70491 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra6O70491 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Stra6O70491 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Stra6O70491 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Stra6O70491 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Stra6O70491 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.2■□□□□ 0.5
Stra6O70491 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.2■□□□□ 0.5
Stra6O70491 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.2■□□□□ 0.5
Stra6O70491 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Stra6O70491 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.2■□□□□ 0.5
Stra6O70491 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Stra6O70491 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Stra6O70491 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Stra6O70491 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.19■□□□□ 0.5
Stra6O70491 Gm25745-201ENSMUST00000174945 133 ntBASIC18.19■□□□□ 0.5
Stra6O70491 Gm18195-201ENSMUST00000207604 706 ntBASIC18.19■□□□□ 0.5
Stra6O70491 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Stra6O70491 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Stra6O70491 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms