Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ubr1O70481 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
Ubr1O70481 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.4■■□□□ 1.02
Ubr1O70481 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr1O70481 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.39■■□□□ 1.02
Ubr1O70481 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr1O70481 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr1O70481 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr1O70481 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.39■■□□□ 1.01
Ubr1O70481 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.39■■□□□ 1.01
Ubr1O70481 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr1O70481 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr1O70481 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubr1O70481 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ubr1O70481 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Gm9727-201ENSMUST00000161387 555 ntBASIC21.38■■□□□ 1.01
Ubr1O70481 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.38■■□□□ 1.01
Ubr1O70481 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.38■■□□□ 1.01
Ubr1O70481 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.38■■□□□ 1.01
Ubr1O70481 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ubr1O70481 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ubr1O70481 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ubr1O70481 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr1O70481 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.37■■□□□ 1.01
Ubr1O70481 Gm15467-201ENSMUST00000120582 445 ntBASIC21.37■■□□□ 1.01
Ubr1O70481 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.37■■□□□ 1.01
Ubr1O70481 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr1O70481 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr1O70481 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr1O70481 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.36■■□□□ 1.01
Ubr1O70481 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.36■■□□□ 1.01
Ubr1O70481 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ubr1O70481 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr1O70481 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr1O70481 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr1O70481 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr1O70481 Gm7222-201ENSMUST00000117512 906 ntBASIC21.36■■□□□ 1.01
Ubr1O70481 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr1O70481 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.35■■□□□ 1.01
Ubr1O70481 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ubr1O70481 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ubr1O70481 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ubr1O70481 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr1O70481 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ubr1O70481 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Ubr1O70481 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ubr1O70481 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC21.34■■□□□ 1.01
Ubr1O70481 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.34■■□□□ 1.01
Ubr1O70481 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ubr1O70481 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr1O70481 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ubr1O70481 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubr1O70481 Gm11764-201ENSMUST00000120221 623 ntBASIC21.33■■□□□ 1.01
Ubr1O70481 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ubr1O70481 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Ubr1O70481 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
Ubr1O70481 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubr1O70481 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubr1O70481 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubr1O70481 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubr1O70481 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms