Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.03■□□□□ -0
Pdlim3O70209 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.03■□□□□ -0
Pdlim3O70209 Gm10602-201ENSMUST00000098239 609 ntBASIC15.03■□□□□ -0
Pdlim3O70209 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim3O70209 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pdlim3O70209 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.02■□□□□ -0
Pdlim3O70209 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim3O70209 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim3O70209 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Pdlim3O70209 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim3O70209 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.02■□□□□ -0
Pdlim3O70209 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.02■□□□□ -0
Pdlim3O70209 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pdlim3O70209 Gm18666-201ENSMUST00000190039 958 ntBASIC15.02■□□□□ -0
Pdlim3O70209 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.02■□□□□ -0
Pdlim3O70209 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.02■□□□□ -0
Pdlim3O70209 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Pdlim3O70209 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim3O70209 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim3O70209 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim3O70209 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim3O70209 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.02□□□□□ -0.01
Pdlim3O70209 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim3O70209 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim3O70209 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim3O70209 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim3O70209 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim3O70209 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.01□□□□□ -0.01
Pdlim3O70209 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Pdlim3O70209 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.01□□□□□ -0.01
Pdlim3O70209 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim3O70209 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim3O70209 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim3O70209 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim3O70209 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15□□□□□ -0.01
Pdlim3O70209 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pdlim3O70209 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15□□□□□ -0.01
Pdlim3O70209 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pdlim3O70209 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim3O70209 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pdlim3O70209 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim3O70209 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim3O70209 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15□□□□□ -0.01
Pdlim3O70209 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim3O70209 Nrn1-203ENSMUST00000223611 1443 ntBASIC15□□□□□ -0.01
Pdlim3O70209 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pdlim3O70209 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms