Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sigmar1O55242 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sigmar1O55242 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.5□□□□□ -0.57
Sigmar1O55242 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.5□□□□□ -0.57
Sigmar1O55242 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sigmar1O55242 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sigmar1O55242 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sigmar1O55242 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sigmar1O55242 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sigmar1O55242 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sigmar1O55242 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.49□□□□□ -0.57
Sigmar1O55242 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sigmar1O55242 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Gm13238-201ENSMUST00000117655 780 ntBASIC11.49□□□□□ -0.57
Sigmar1O55242 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC11.49□□□□□ -0.57
Sigmar1O55242 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Tgds-204ENSMUST00000228543 1594 ntBASIC11.49□□□□□ -0.57
Sigmar1O55242 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sigmar1O55242 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sigmar1O55242 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.48□□□□□ -0.57
Sigmar1O55242 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.48□□□□□ -0.57
Sigmar1O55242 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sigmar1O55242 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sigmar1O55242 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sigmar1O55242 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.47□□□□□ -0.57
Sigmar1O55242 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sigmar1O55242 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC11.47□□□□□ -0.57
Sigmar1O55242 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC11.47□□□□□ -0.57
Sigmar1O55242 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sigmar1O55242 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms