Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.18■□□□□ 0.5
Trdmt1O55055 Gm25925-201ENSMUST00000158314 306 ntBASIC18.18■□□□□ 0.5
Trdmt1O55055 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.18■□□□□ 0.5
Trdmt1O55055 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.18■□□□□ 0.5
Trdmt1O55055 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.18■□□□□ 0.5
Trdmt1O55055 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trdmt1O55055 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.17■□□□□ 0.5
Trdmt1O55055 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trdmt1O55055 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.17■□□□□ 0.5
Trdmt1O55055 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trdmt1O55055 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trdmt1O55055 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trdmt1O55055 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trdmt1O55055 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Gm12497-201ENSMUST00000138778 237 ntBASIC18.15■□□□□ 0.5
Trdmt1O55055 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Trdmt1O55055 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trdmt1O55055 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trdmt1O55055 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Trdmt1O55055 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trdmt1O55055 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trdmt1O55055 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trdmt1O55055 Gm11779-201ENSMUST00000118541 368 ntBASIC18.14■□□□□ 0.49
Trdmt1O55055 Gm4459-201ENSMUST00000118750 468 ntBASIC18.14■□□□□ 0.49
Trdmt1O55055 Gm15173-201ENSMUST00000122049 433 ntBASIC18.14■□□□□ 0.49
Trdmt1O55055 Gm11594-201ENSMUST00000122313 162 ntBASIC18.14■□□□□ 0.49
Trdmt1O55055 Gm36967-201ENSMUST00000193814 266 ntBASIC18.14■□□□□ 0.49
Trdmt1O55055 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.14■□□□□ 0.49
Trdmt1O55055 Psmb5-202ENSMUST00000227257 622 ntBASIC18.14■□□□□ 0.49
Trdmt1O55055 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trdmt1O55055 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trdmt1O55055 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trdmt1O55055 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trdmt1O55055 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.13■□□□□ 0.49
Trdmt1O55055 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdmt1O55055 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms