Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn5O54942 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn5O54942 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn5O54942 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.15■□□□□ 0.34
Cldn5O54942 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.15■□□□□ 0.34
Cldn5O54942 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn5O54942 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn5O54942 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cldn5O54942 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn5O54942 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cldn5O54942 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn5O54942 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cldn5O54942 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.14■□□□□ 0.33
Cldn5O54942 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldn5O54942 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.14■□□□□ 0.33
Cldn5O54942 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldn5O54942 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cldn5O54942 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.14■□□□□ 0.33
Cldn5O54942 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cldn5O54942 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Cldn5O54942 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cldn5O54942 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn5O54942 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cldn5O54942 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cldn5O54942 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn5O54942 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Gm10052-201ENSMUST00000168019 960 ntBASIC17.13■□□□□ 0.33
Cldn5O54942 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.13■□□□□ 0.33
Cldn5O54942 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Gm7729-201ENSMUST00000050143 801 ntBASIC17.13■□□□□ 0.33
Cldn5O54942 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cldn5O54942 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cldn5O54942 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn5O54942 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cldn5O54942 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.12■□□□□ 0.33
Cldn5O54942 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cldn5O54942 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cldn5O54942 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.12■□□□□ 0.33
Cldn5O54942 Gm27741-201ENSMUST00000185060 237 ntBASIC17.12■□□□□ 0.33
Cldn5O54942 Gm44430-201ENSMUST00000203376 995 ntBASIC17.12■□□□□ 0.33
Cldn5O54942 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.12■□□□□ 0.33
Cldn5O54942 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn5O54942 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn5O54942 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn5O54942 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cldn5O54942 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Cldn5O54942 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cldn5O54942 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.11■□□□□ 0.33
Cldn5O54942 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms