Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.61□□□□□ -0.23
Tnfsf12O54907 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf12O54907 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.6□□□□□ -0.23
Tnfsf12O54907 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.6□□□□□ -0.23
Tnfsf12O54907 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.6□□□□□ -0.23
Tnfsf12O54907 Gm27463-201ENSMUST00000183569 57 ntBASIC13.6□□□□□ -0.23
Tnfsf12O54907 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.6□□□□□ -0.23
Tnfsf12O54907 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Gm30025-201ENSMUST00000218555 728 ntBASIC13.6□□□□□ -0.23
Tnfsf12O54907 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfsf12O54907 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Tnfsf12O54907 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.59□□□□□ -0.23
Tnfsf12O54907 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tnfsf12O54907 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.58□□□□□ -0.23
Tnfsf12O54907 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.58□□□□□ -0.23
Tnfsf12O54907 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfsf12O54907 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Tnfsf12O54907 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.58□□□□□ -0.23
Tnfsf12O54907 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfsf12O54907 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.58□□□□□ -0.23
Tnfsf12O54907 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfsf12O54907 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.58□□□□□ -0.24
Tnfsf12O54907 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf12O54907 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms