Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.23□□□□□ -0.13
DffbO54788 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.23□□□□□ -0.13
DffbO54788 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Gm37025-201ENSMUST00000195159 829 ntBASIC14.23□□□□□ -0.13
DffbO54788 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.23□□□□□ -0.13
DffbO54788 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
DffbO54788 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.23□□□□□ -0.13
DffbO54788 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
DffbO54788 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DffbO54788 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DffbO54788 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.22□□□□□ -0.13
DffbO54788 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DffbO54788 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Gm12527-201ENSMUST00000117967 564 ntBASIC14.22□□□□□ -0.13
DffbO54788 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.22□□□□□ -0.13
DffbO54788 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.22□□□□□ -0.13
DffbO54788 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Trmt13-210ENSMUST00000198454 880 ntBASIC14.22□□□□□ -0.13
DffbO54788 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.22□□□□□ -0.13
DffbO54788 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DffbO54788 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DffbO54788 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
DffbO54788 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.21□□□□□ -0.13
DffbO54788 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DffbO54788 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DffbO54788 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DffbO54788 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.21□□□□□ -0.13
DffbO54788 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DffbO54788 Gm27000-201ENSMUST00000182943 842 ntBASIC14.21□□□□□ -0.13
DffbO54788 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DffbO54788 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
DffbO54788 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
DffbO54788 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DffbO54788 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DffbO54788 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
DffbO54788 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DffbO54788 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
DffbO54788 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.2□□□□□ -0.14
DffbO54788 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
DffbO54788 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
DffbO54788 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DffbO54788 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
DffbO54788 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.2□□□□□ -0.14
DffbO54788 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.2□□□□□ -0.14
DffbO54788 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DffbO54788 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms