Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SpibO35906 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SpibO35906 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SpibO35906 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SpibO35906 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SpibO35906 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SpibO35906 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SpibO35906 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.18■□□□□ 0.5
SpibO35906 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SpibO35906 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SpibO35906 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SpibO35906 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.17■□□□□ 0.5
SpibO35906 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SpibO35906 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.17■□□□□ 0.5
SpibO35906 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.17■□□□□ 0.5
SpibO35906 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.17■□□□□ 0.5
SpibO35906 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.17■□□□□ 0.5
SpibO35906 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.17■□□□□ 0.5
SpibO35906 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.17■□□□□ 0.5
SpibO35906 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SpibO35906 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
SpibO35906 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SpibO35906 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SpibO35906 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Gm4459-201ENSMUST00000118750 468 ntBASIC18.16■□□□□ 0.5
SpibO35906 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.16■□□□□ 0.5
SpibO35906 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.16■□□□□ 0.5
SpibO35906 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.16■□□□□ 0.5
SpibO35906 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.16■□□□□ 0.5
SpibO35906 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SpibO35906 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SpibO35906 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
SpibO35906 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.16■□□□□ 0.5
SpibO35906 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SpibO35906 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SpibO35906 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Gm11780-201ENSMUST00000136880 516 ntBASIC18.15■□□□□ 0.5
SpibO35906 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Gm7230-201ENSMUST00000173026 815 ntBASIC18.15■□□□□ 0.5
SpibO35906 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
SpibO35906 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SpibO35906 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SpibO35906 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SpibO35906 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SpibO35906 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SpibO35906 Gm8097-201ENSMUST00000117903 829 ntBASIC18.14■□□□□ 0.49
SpibO35906 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.14■□□□□ 0.49
SpibO35906 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.14■□□□□ 0.49
SpibO35906 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SpibO35906 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SpibO35906 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.14■□□□□ 0.49
SpibO35906 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.14■□□□□ 0.49
SpibO35906 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.14■□□□□ 0.49
SpibO35906 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SpibO35906 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SpibO35906 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
SpibO35906 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.14■□□□□ 0.49
SpibO35906 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
SpibO35906 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SpibO35906 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SpibO35906 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SpibO35906 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SpibO35906 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.13■□□□□ 0.49
SpibO35906 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.13■□□□□ 0.49
SpibO35906 Gm5364-201ENSMUST00000216789 889 ntBASIC18.13■□□□□ 0.49
SpibO35906 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SpibO35906 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms