Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.43■□□□□ 0.7
Ppef1O35655 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ppef1O35655 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ppef1O35655 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ppef1O35655 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ppef1O35655 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.43■□□□□ 0.7
Ppef1O35655 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ppef1O35655 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.42■□□□□ 0.7
Ppef1O35655 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ppef1O35655 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.42■□□□□ 0.7
Ppef1O35655 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ppef1O35655 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ppef1O35655 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ppef1O35655 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.41■□□□□ 0.7
Ppef1O35655 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ppef1O35655 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppef1O35655 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppef1O35655 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppef1O35655 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ppef1O35655 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.41■□□□□ 0.7
Ppef1O35655 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.41■□□□□ 0.7
Ppef1O35655 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ppef1O35655 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.41■□□□□ 0.7
Ppef1O35655 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.41■□□□□ 0.7
Ppef1O35655 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppef1O35655 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppef1O35655 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ppef1O35655 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.41■□□□□ 0.7
Ppef1O35655 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.4■□□□□ 0.7
Ppef1O35655 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ppef1O35655 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Gm13223-201ENSMUST00000118609 747 ntBASIC19.4■□□□□ 0.7
Ppef1O35655 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.4■□□□□ 0.7
Ppef1O35655 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.4■□□□□ 0.7
Ppef1O35655 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.4■□□□□ 0.7
Ppef1O35655 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.4■□□□□ 0.7
Ppef1O35655 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ppef1O35655 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ppef1O35655 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ppef1O35655 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.39■□□□□ 0.69
Ppef1O35655 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ppef1O35655 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.39■□□□□ 0.69
Ppef1O35655 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC19.39■□□□□ 0.69
Ppef1O35655 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ppef1O35655 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ppef1O35655 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ppef1O35655 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ppef1O35655 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.38■□□□□ 0.69
Ppef1O35655 Gm13597-201ENSMUST00000121239 375 ntBASIC19.38■□□□□ 0.69
Ppef1O35655 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC19.38■□□□□ 0.69
Ppef1O35655 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.38■□□□□ 0.69
Ppef1O35655 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.38■□□□□ 0.69
Ppef1O35655 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ppef1O35655 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ppef1O35655 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.38■□□□□ 0.69
Ppef1O35655 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppef1O35655 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppef1O35655 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppef1O35655 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ppef1O35655 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ppef1O35655 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ppef1O35655 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.37■□□□□ 0.69
Ppef1O35655 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ppef1O35655 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ppef1O35655 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ppef1O35655 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ppef1O35655 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms