Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Capn1O35350 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.32■□□□□ 0.04
Capn1O35350 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.32■□□□□ 0.04
Capn1O35350 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Capn1O35350 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.32■□□□□ 0.04
Capn1O35350 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Capn1O35350 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.32■□□□□ 0.04
Capn1O35350 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.32■□□□□ 0.04
Capn1O35350 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Capn1O35350 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Capn1O35350 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Capn1O35350 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.31■□□□□ 0.04
Capn1O35350 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Capn1O35350 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.31■□□□□ 0.04
Capn1O35350 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Capn1O35350 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.31■□□□□ 0.04
Capn1O35350 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.31■□□□□ 0.04
Capn1O35350 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.31■□□□□ 0.04
Capn1O35350 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.31■□□□□ 0.04
Capn1O35350 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Capn1O35350 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Capn1O35350 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.3■□□□□ 0.04
Capn1O35350 Gm18958-201ENSMUST00000174258 762 ntBASIC15.3■□□□□ 0.04
Capn1O35350 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Capn1O35350 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.3■□□□□ 0.04
Capn1O35350 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Capn1O35350 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.29■□□□□ 0.04
Capn1O35350 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.29■□□□□ 0.04
Capn1O35350 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.29■□□□□ 0.04
Capn1O35350 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Capn1O35350 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Capn1O35350 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Gm11950-201ENSMUST00000121615 838 ntBASIC15.29■□□□□ 0.04
Capn1O35350 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.29■□□□□ 0.04
Capn1O35350 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.29■□□□□ 0.04
Capn1O35350 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.29■□□□□ 0.04
Capn1O35350 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Capn1O35350 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.28■□□□□ 0.04
Capn1O35350 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms