Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Mir770-201ENSMUST00000103252 94 ntBASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfrsf11aO35305 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Gm5587-201ENSMUST00000206270 674 ntBASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfrsf11aO35305 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfrsf11aO35305 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Gm9013-201ENSMUST00000132939 882 ntBASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Tnfrsf11aO35305 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms