Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Hdac1O09106 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.7■□□□□ 0.74
Hdac1O09106 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.7■□□□□ 0.74
Hdac1O09106 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.7■□□□□ 0.74
Hdac1O09106 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hdac1O09106 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.69■□□□□ 0.74
Hdac1O09106 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac1O09106 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hdac1O09106 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.68■□□□□ 0.74
Hdac1O09106 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.68■□□□□ 0.74
Hdac1O09106 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.68■□□□□ 0.74
Hdac1O09106 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.68■□□□□ 0.74
Hdac1O09106 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Mir1199-201ENSMUST00000117015 119 ntBASIC19.68■□□□□ 0.74
Hdac1O09106 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Hdac1O09106 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.68■□□□□ 0.74
Hdac1O09106 Timm23-208ENSMUST00000226683 750 ntBASIC19.68■□□□□ 0.74
Hdac1O09106 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hdac1O09106 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hdac1O09106 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Hdac1O09106 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac1O09106 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Hdac1O09106 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.67■□□□□ 0.74
Hdac1O09106 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Hdac1O09106 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.67■□□□□ 0.74
Hdac1O09106 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.67■□□□□ 0.74
Hdac1O09106 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac1O09106 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.67■□□□□ 0.74
Hdac1O09106 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hdac1O09106 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hdac1O09106 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.66■□□□□ 0.74
Hdac1O09106 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.66■□□□□ 0.74
Hdac1O09106 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.66■□□□□ 0.74
Hdac1O09106 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hdac1O09106 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hdac1O09106 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Hdac1O09106 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hdac1O09106 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac1O09106 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hdac1O09106 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Hdac1O09106 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.65■□□□□ 0.74
Hdac1O09106 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Hdac1O09106 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac1O09106 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms