Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.15■□□□□ 0.34
Ebf3O08791 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ebf3O08791 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Ebf3O08791 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ebf3O08791 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ebf3O08791 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.14■□□□□ 0.33
Ebf3O08791 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.14■□□□□ 0.33
Ebf3O08791 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.14■□□□□ 0.33
Ebf3O08791 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.14■□□□□ 0.33
Ebf3O08791 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.14■□□□□ 0.33
Ebf3O08791 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Dancr-204ENSMUST00000132389 2347 ntBASIC17.14■□□□□ 0.33
Ebf3O08791 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.14■□□□□ 0.33
Ebf3O08791 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebf3O08791 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Gm12895-201ENSMUST00000122214 226 ntBASIC17.13■□□□□ 0.33
Ebf3O08791 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ebf3O08791 Gm28659-201ENSMUST00000188013 759 ntBASIC17.13■□□□□ 0.33
Ebf3O08791 Gm5864-201ENSMUST00000202263 970 ntBASIC17.13■□□□□ 0.33
Ebf3O08791 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ebf3O08791 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebf3O08791 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ebf3O08791 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ebf3O08791 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.12■□□□□ 0.33
Ebf3O08791 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.12■□□□□ 0.33
Ebf3O08791 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.12■□□□□ 0.33
Ebf3O08791 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ebf3O08791 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebf3O08791 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
Ebf3O08791 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.11■□□□□ 0.33
Ebf3O08791 Gm27459-201ENSMUST00000184860 107 ntBASIC17.11■□□□□ 0.33
Ebf3O08791 Gm43347-201ENSMUST00000200226 580 ntBASIC17.11■□□□□ 0.33
Ebf3O08791 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.11■□□□□ 0.33
Ebf3O08791 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.11■□□□□ 0.33
Ebf3O08791 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ebf3O08791 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebf3O08791 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.1■□□□□ 0.33
Ebf3O08791 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.1■□□□□ 0.33
Ebf3O08791 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms