Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tnfrsf11bO08712 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Actl10-202ENSMUST00000226583 1501 ntBASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.8■□□□□ 0.28
Tnfrsf11bO08712 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf11bO08712 Phf7-203ENSMUST00000226565 1971 ntBASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Gm5417-201ENSMUST00000079706 384 ntBASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf11bO08712 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Gm11539-201ENSMUST00000119837 557 ntBASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms