Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Gm10517-202ENSMUST00000192970 758 ntBASIC15.14■□□□□ 0.01
Shisa8J3QNX5 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.14■□□□□ 0.01
Shisa8J3QNX5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shisa8J3QNX5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Gm24841-201ENSMUST00000158676 357 ntBASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Shisa8J3QNX5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Gm37292-201ENSMUST00000192062 758 ntBASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Shisa8J3QNX5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa8J3QNX5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms