Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.88■□□□□ 0.77
NpcdF8VQB8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NpcdF8VQB8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Gm8097-201ENSMUST00000117903 829 ntBASIC19.87■□□□□ 0.77
NpcdF8VQB8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.87■□□□□ 0.77
NpcdF8VQB8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NpcdF8VQB8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NpcdF8VQB8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.85■□□□□ 0.77
NpcdF8VQB8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Gm25911-201ENSMUST00000157621 56 ntBASIC19.85■□□□□ 0.77
NpcdF8VQB8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.85■□□□□ 0.77
NpcdF8VQB8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NpcdF8VQB8 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.85■□□□□ 0.77
NpcdF8VQB8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NpcdF8VQB8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.84■□□□□ 0.77
NpcdF8VQB8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Gm10175-201ENSMUST00000086013 645 ntBASIC19.84■□□□□ 0.77
NpcdF8VQB8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NpcdF8VQB8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Gm6550-201ENSMUST00000187574 993 ntBASIC19.83■□□□□ 0.77
NpcdF8VQB8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NpcdF8VQB8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NpcdF8VQB8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms