Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Colca2F8VPY8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Colca2F8VPY8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.65■□□□□ 0.1
Colca2F8VPY8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.65■□□□□ 0.1
Colca2F8VPY8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Colca2F8VPY8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Gm11025-201ENSMUST00000140773 466 ntBASIC15.64■□□□□ 0.09
Colca2F8VPY8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Gm5682-201ENSMUST00000173402 505 ntBASIC15.64■□□□□ 0.09
Colca2F8VPY8 Gm27646-201ENSMUST00000183989 110 ntBASIC15.64■□□□□ 0.09
Colca2F8VPY8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Colca2F8VPY8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Gm14057-201ENSMUST00000120631 482 ntBASIC15.63■□□□□ 0.09
Colca2F8VPY8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.63■□□□□ 0.09
Colca2F8VPY8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Colca2F8VPY8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.62■□□□□ 0.09
Colca2F8VPY8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Colca2F8VPY8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Mir6404-201ENSMUST00000183699 94 ntBASIC15.61■□□□□ 0.09
Colca2F8VPY8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.61■□□□□ 0.09
Colca2F8VPY8 Gm18622-201ENSMUST00000219361 595 ntBASIC15.61■□□□□ 0.09
Colca2F8VPY8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.61■□□□□ 0.09
Colca2F8VPY8 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.61■□□□□ 0.09
Colca2F8VPY8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Colca2F8VPY8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms