Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh11xF6ZNL5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Gm23634-201ENSMUST00000175071 91 ntBASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh11xF6ZNL5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdh11xF6ZNL5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh11xF6ZNL5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdh11xF6ZNL5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh11xF6ZNL5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh11xF6ZNL5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh11xF6ZNL5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Gm11336-201ENSMUST00000118168 334 ntBASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh11xF6ZNL5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 AA414768-201ENSMUST00000121924 1257 ntBASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms