Protein–RNA interactions for Protein: E9Q5Z9

Gm11239, Predicted gene 11239, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11239E9Q5Z9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 Gm10355-201ENSMUST00000097146 517 ntBASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11239E9Q5Z9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Gm11239E9Q5Z9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm11239E9Q5Z9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Gm27525-201ENSMUST00000184465 107 ntBASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Gm7506-201ENSMUST00000207758 815 ntBASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm11239E9Q5Z9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11239E9Q5Z9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Gm12497-201ENSMUST00000138778 237 ntBASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.18■□□□□ 0.34
Gm11239E9Q5Z9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11239E9Q5Z9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms