Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpsf4lE9Q2N0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpsf4lE9Q2N0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Gm9013-201ENSMUST00000132939 882 ntBASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Gm23634-201ENSMUST00000175071 91 ntBASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpsf4lE9Q2N0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpsf4lE9Q2N0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Mir770-201ENSMUST00000103252 94 ntBASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cpsf4lE9Q2N0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms