Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.27□□□□□ -0.93
Herc1E9PZP8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.27□□□□□ -0.93
Herc1E9PZP8 Gm2308-201ENSMUST00000166539 1004 ntBASIC9.27□□□□□ -0.93
Herc1E9PZP8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Ddx41-204ENSMUST00000224765 2199 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm29707-201ENSMUST00000196325 491 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm37466-201ENSMUST00000195692 652 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm9889-202ENSMUST00000206983 1577 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gm42693-201ENSMUST00000196779 631 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.26□□□□□ -0.93
Herc1E9PZP8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Herc1E9PZP8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gm8349-201ENSMUST00000182720 1003 ntBASIC9.25□□□□□ -0.93
Herc1E9PZP8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc1E9PZP8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms