Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Gm6858-201ENSMUST00000208582 1468 ntBASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Hfm1D3Z4R1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Hfm1D3Z4R1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Hfm1D3Z4R1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Hfm1D3Z4R1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
Hfm1D3Z4R1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Hfm1D3Z4R1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Hfm1D3Z4R1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hfm1D3Z4R1 Gm14057-201ENSMUST00000120631 482 ntBASIC23.14■■□□□ 1.29
Hfm1D3Z4R1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
Hfm1D3Z4R1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hfm1D3Z4R1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hfm1D3Z4R1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hfm1D3Z4R1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 AC159295.1-201ENSMUST00000225326 940 ntBASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hfm1D3Z4R1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Gm18622-201ENSMUST00000219361 595 ntBASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Gm15743-202ENSMUST00000182690 1901 ntBASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Hfm1D3Z4R1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Gm2308-201ENSMUST00000166539 1004 ntBASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 AC124549.3-201ENSMUST00000225541 367 ntBASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Gm8396-201ENSMUST00000057361 823 ntBASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hfm1D3Z4R1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 AC159114.1-201ENSMUST00000220349 266 ntBASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Gm43808-201ENSMUST00000202534 2065 ntBASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Dmtn-207ENSMUST00000228001 2437 ntBASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hfm1D3Z4R1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Hfm1D3Z4R1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gm14701-201ENSMUST00000117156 348 ntBASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gm27300-201ENSMUST00000184085 97 ntBASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gm27335-201ENSMUST00000184758 97 ntBASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms