Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Gm29707-201ENSMUST00000196325 491 ntBASIC14.78□□□□□ -0.04
Shank1D3YZU1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Gm7506-201ENSMUST00000207758 815 ntBASIC14.78□□□□□ -0.04
Shank1D3YZU1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.78□□□□□ -0.04
Shank1D3YZU1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Gm25911-201ENSMUST00000157621 56 ntBASIC14.78□□□□□ -0.04
Shank1D3YZU1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shank1D3YZU1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Gm25990-201ENSMUST00000102440 86 ntBASIC14.77□□□□□ -0.04
Shank1D3YZU1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shank1D3YZU1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Gm9727-201ENSMUST00000161387 555 ntBASIC14.77□□□□□ -0.05
Shank1D3YZU1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Gm10175-201ENSMUST00000086013 645 ntBASIC14.77□□□□□ -0.05
Shank1D3YZU1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Shank1D3YZU1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Gm15173-201ENSMUST00000122049 433 ntBASIC14.76□□□□□ -0.05
Shank1D3YZU1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.76□□□□□ -0.05
Shank1D3YZU1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shank1D3YZU1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shank1D3YZU1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.75□□□□□ -0.05
Shank1D3YZU1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Gm25745-201ENSMUST00000174945 133 ntBASIC14.75□□□□□ -0.05
Shank1D3YZU1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Gm6550-201ENSMUST00000187574 993 ntBASIC14.75□□□□□ -0.05
Shank1D3YZU1 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.75□□□□□ -0.05
Shank1D3YZU1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms