Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Scn7aB1AYL1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Scn7aB1AYL1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Scn7aB1AYL1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Scn7aB1AYL1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Gm15467-201ENSMUST00000120582 445 ntBASIC21.29■■□□□ 1
Scn7aB1AYL1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.29■■□□□ 1
Scn7aB1AYL1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.29■■□□□ 1
Scn7aB1AYL1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Scn7aB1AYL1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn7aB1AYL1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC21.28■■□□□ 1
Scn7aB1AYL1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scn7aB1AYL1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scn7aB1AYL1 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.28■■□□□ 1
Scn7aB1AYL1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.28■■□□□ 1
Scn7aB1AYL1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Scn7aB1AYL1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.28■■□□□ 1
Scn7aB1AYL1 Gm25925-201ENSMUST00000158314 306 ntBASIC21.28■■□□□ 1
Scn7aB1AYL1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.28■■□□□ 1
Scn7aB1AYL1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn7aB1AYL1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scn7aB1AYL1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn7aB1AYL1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Scn7aB1AYL1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scn7aB1AYL1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn7aB1AYL1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scn7aB1AYL1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Scn7aB1AYL1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Scn7aB1AYL1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.24■□□□□ 0.99
Scn7aB1AYL1 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn7aB1AYL1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms