Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh2d4bA6X942 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sh2d4bA6X942 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh2d4bA6X942 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.69■□□□□ 0.42
Sh2d4bA6X942 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.69■□□□□ 0.42
Sh2d4bA6X942 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sh2d4bA6X942 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Gm18195-201ENSMUST00000207604 706 ntBASIC17.67■□□□□ 0.42
Sh2d4bA6X942 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4bA6X942 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms