Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col6a5A6H584 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col6a5A6H584 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Col6a5A6H584 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Col6a5A6H584 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a5A6H584 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Gm25948-201ENSMUST00000175334 112 ntBASIC12.44□□□□□ -0.42
Col6a5A6H584 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Col6a5A6H584 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a5A6H584 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.44□□□□□ -0.42
Col6a5A6H584 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Col6a5A6H584 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.44□□□□□ -0.42
Col6a5A6H584 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a5A6H584 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC12.43□□□□□ -0.42
Col6a5A6H584 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.43□□□□□ -0.42
Col6a5A6H584 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.43□□□□□ -0.42
Col6a5A6H584 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Col6a5A6H584 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a5A6H584 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.43□□□□□ -0.42
Col6a5A6H584 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.43□□□□□ -0.42
Col6a5A6H584 Gm25406-201ENSMUST00000157599 105 ntBASIC12.43□□□□□ -0.42
Col6a5A6H584 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col6a5A6H584 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC12.43□□□□□ -0.42
Col6a5A6H584 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a5A6H584 Gm15427-201ENSMUST00000117288 531 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm13223-201ENSMUST00000118609 747 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.42□□□□□ -0.42
Col6a5A6H584 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm8825-201ENSMUST00000182565 998 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col6a5A6H584 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col6a5A6H584 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms