Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.29■□□□□ 0.36
Scn1aA2APX8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.28■□□□□ 0.36
Scn1aA2APX8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm12644-201ENSMUST00000119935 606 ntBASIC17.28■□□□□ 0.36
Scn1aA2APX8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.28■□□□□ 0.36
Scn1aA2APX8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.28■□□□□ 0.36
Scn1aA2APX8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn1aA2APX8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Scn1aA2APX8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Birc2-201ENSMUST00000054878 378 ntBASIC17.27■□□□□ 0.36
Scn1aA2APX8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn1aA2APX8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn1aA2APX8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn1aA2APX8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn1aA2APX8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn1aA2APX8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Scn1aA2APX8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Gm12895-201ENSMUST00000122214 226 ntBASIC17.26■□□□□ 0.35
Scn1aA2APX8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn1aA2APX8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Gm24589-201ENSMUST00000116692 94 ntBASIC17.26■□□□□ 0.35
Scn1aA2APX8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.26■□□□□ 0.35
Scn1aA2APX8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn1aA2APX8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms