Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm13216-201ENSMUST00000117145 591 ntBASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm27405-201ENSMUST00000184201 112 ntBASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv1-88A0A140T8N1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Igkv1-88A0A140T8N1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv1-88A0A140T8N1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC10.96□□□□□ -0.66
Igkv1-88A0A140T8N1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Igkv1-88A0A140T8N1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv1-88A0A140T8N1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Igkv1-88A0A140T8N1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm37166-201ENSMUST00000195473 2474 ntBASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv1-88A0A140T8N1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm12896-201ENSMUST00000118430 226 ntBASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm8495-201ENSMUST00000188740 694 ntBASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Igkv1-88A0A140T8N1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
Igkv1-88A0A140T8N1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms