Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
Gm35339A0A140LHH9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Gm35339A0A140LHH9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Gm35339A0A140LHH9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC34.5■■■■□ 3.11
Gm35339A0A140LHH9 Gm44335-201ENSMUST00000196879 141 ntBASIC34.5■■■■□ 3.11
Gm35339A0A140LHH9 Gm44297-201ENSMUST00000198304 141 ntBASIC34.5■■■■□ 3.11
Gm35339A0A140LHH9 Gm44346-201ENSMUST00000198851 141 ntBASIC34.5■■■■□ 3.11
Gm35339A0A140LHH9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Gm35339A0A140LHH9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC34.5■■■■□ 3.11
Gm35339A0A140LHH9 Gm11745-201ENSMUST00000121669 448 ntBASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Gm43125-201ENSMUST00000201724 730 ntBASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Gm35339A0A140LHH9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Gm45747-201ENSMUST00000212203 999 ntBASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Gm35339A0A140LHH9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
Gm35339A0A140LHH9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Gm11185-201ENSMUST00000117732 1007 ntBASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Gm35339A0A140LHH9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
Gm35339A0A140LHH9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
Gm35339A0A140LHH9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC34.45■■■■□ 3.11
Gm35339A0A140LHH9 Gm12892-201ENSMUST00000117367 1146 ntBASIC34.45■■■■□ 3.11
Gm35339A0A140LHH9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC34.45■■■■□ 3.11
Gm35339A0A140LHH9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Gm35339A0A140LHH9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Gm35339A0A140LHH9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gm35339A0A140LHH9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
Gm35339A0A140LHH9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC34.42■■■■□ 3.1
Gm35339A0A140LHH9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms