Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gm10517-202ENSMUST00000192970 758 ntBASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gm37025-201ENSMUST00000195159 829 ntBASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav19A0A0B4J1K4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Gm17661-201ENSMUST00000170317 270 ntBASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Gm27405-201ENSMUST00000184201 112 ntBASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav19A0A0B4J1K4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav19A0A0B4J1K4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav19A0A0B4J1K4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav19A0A0B4J1K4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav19A0A0B4J1K4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav19A0A0B4J1K4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav19A0A0B4J1K4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav19A0A0B4J1K4 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav19A0A0B4J1K4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms