Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm9013-201ENSMUST00000132939 882 ntBASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh7A0A0A6YY83 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm13836-201ENSMUST00000121159 501 ntBASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh7A0A0A6YY83 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh7A0A0A6YY83 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Pcdh7A0A0A6YY83 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh7A0A0A6YY83 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh7A0A0A6YY83 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh7A0A0A6YY83 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh7A0A0A6YY83 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh7A0A0A6YY83 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh7A0A0A6YY83 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh7A0A0A6YY83 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdh7A0A0A6YY83 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh7A0A0A6YY83 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms