Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Gm17661-201ENSMUST00000170317 270 ntBASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm13168-201ENSMUST00000121771 632 ntBASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm10653-202ENSMUST00000139570 835 ntBASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm10698-201ENSMUST00000182663 604 ntBASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm9731-201ENSMUST00000209480 747 ntBASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm18958-201ENSMUST00000174258 762 ntBASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-49A0A0A6YWX2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-49A0A0A6YWX2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-49A0A0A6YWX2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-49A0A0A6YWX2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-49A0A0A6YWX2 Mir1199-201ENSMUST00000117015 119 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms