Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm22240-201ENSMUST00000175225 82 ntBASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav21-dv12A0A075B6C4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm27011-201ENSMUST00000182352 972 ntBASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav21-dv12A0A075B6C4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms