Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Dio3-201ENSMUST00000097228 1449 ntBASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm42545-201ENSMUST00000202755 922 ntBASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm11249-201ENSMUST00000117071 859 ntBASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm8495-201ENSMUST00000188740 694 ntBASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm4974-201ENSMUST00000209974 875 ntBASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13-4-dv7A0A075B6C2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms