Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Dio3-201ENSMUST00000097228 1449 ntBASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm10517-202ENSMUST00000192970 758 ntBASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-5A0A075B6B9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Prob1-201ENSMUST00000097619 3021 ntBASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm5874-201ENSMUST00000096101 508 ntBASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6d-5A0A075B6B9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm10849-201ENSMUST00000100397 618 ntBASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6d-5A0A075B6B9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms