Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav3-4A0A075B654 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3-4A0A075B654 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav3-4A0A075B654 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms