Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12-3A0A075B648 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Gm43060-201ENSMUST00000200621 289 ntBASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12-3A0A075B648 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 App-207ENSMUST00000227737 2827 ntBASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12-3A0A075B648 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms