Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Gm5812-201ENSMUST00000061073 957 ntBASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4n-4A0A075B615 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4n-4A0A075B615 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Gm13534-201ENSMUST00000121169 513 ntBASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4n-4A0A075B615 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Gm12922-201ENSMUST00000120626 809 ntBASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Gm43137-201ENSMUST00000198052 594 ntBASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms