Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 AC006946.3-201ENST00000609791 756 ntBASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 AC006042.3-201ENST00000454684 1469 ntBASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 AC092079.1-201ENST00000558620 1985 ntBASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.47□□□□□ -1.69
SLC44A1Q8WWI5 MTND4P31-201ENST00000425607 1343 ntBASIC4.46□□□□□ -1.69
SLC44A1Q8WWI5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SLC44A1Q8WWI5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.46□□□□□ -1.69
SLC44A1Q8WWI5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SLC44A1Q8WWI5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 RNF6P1-201ENST00000444889 1784 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC096656.1-201ENST00000623826 1364 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 RNA5SP502-201ENST00000362694 119 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 RNU6-906P-201ENST00000384700 70 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AL590290.1-201ENST00000405336 380 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 RPL6P29-201ENST00000414863 865 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC099336.2-201ENST00000422457 254 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 OR5AW1P-201ENST00000426334 1006 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 MTCYBP15-201ENST00000433123 1127 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 RPL23AP93-201ENST00000440847 484 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 VN1R25P-201ENST00000443385 738 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 ELOCP13-201ENST00000443934 329 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 ABCF2P2-201ENST00000450549 296 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC092155.2-201ENST00000454675 477 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC133473.1-201ENST00000455173 299 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC099560.2-201ENST00000457554 255 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 RPL23AP12-201ENST00000467573 473 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC098862.1-201ENST00000504991 413 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 HPRT1P2-201ENST00000505250 544 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 OR51K1P-201ENST00000510214 950 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 OR7H2P-201ENST00000513483 306 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 MYL12AP1-201ENST00000518490 515 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 PHBP17-201ENST00000528576 541 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 DEFB130C-202ENST00000530001 230 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC009974.1-201ENST00000608881 455 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 MIR6891-201ENST00000618788 93 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AL121895.2-201ENST00000619558 447 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AL356863.1-201ENST00000623378 1080 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC109454.4-201ENST00000623411 649 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AC012020.1-201ENST00000624541 1728 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 AP000756.2-201ENST00000624168 2567 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.46□□□□□ -1.7
SLC44A1Q8WWI5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 AL590240.1-201ENST00000334118 313 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 RNU6-304P-201ENST00000364855 107 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 RHOT1P2-201ENST00000366423 333 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 Y_RNA.578-201ENST00000390903 88 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 RPS23P10-201ENST00000416185 486 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 TAF13P2-201ENST00000416876 286 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 XKRYP1-201ENST00000423438 492 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.45□□□□□ -1.7
SLC44A1Q8WWI5 MTATP6P17-201ENST00000431030 672 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms