Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 DUXAP5-201ENST00000529668 529 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC023538.1-201ENST00000534576 736 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC005868.1-201ENST00000536421 331 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC092747.2-201ENST00000545069 983 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 MIR3912-201ENST00000577566 105 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 RN7SL652P-201ENST00000577769 300 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC069366.1-201ENST00000583159 838 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 MIR5096-201ENST00000583713 70 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AP001269.3-201ENST00000588718 329 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC073091.2-201ENST00000603205 907 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC093765.1-201ENST00000603758 881 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC007349.4-201ENST00000608114 532 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AL158163.2-201ENST00000619110 700 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AL157770.1-201ENST00000623049 439 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 SALL4P2-201ENST00000423288 2910 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AC092435.4-201ENST00000623012 4159 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.36□□□□□ -1.71
BEST3Q8N1M1 AL353743.4-201ENST00000422653 1547 ntBASIC4.36□□□□□ -1.71
BEST3Q8N1M1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 CASC19-204ENST00000641001 2055 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 NACA3P-201ENST00000359690 648 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 RNU4-44P-201ENST00000363050 141 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 RNU6-707P-201ENST00000364647 95 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC119751.3-201ENST00000399720 670 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 TMSB4XP8-201ENST00000402089 135 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 RN7SKP267-201ENST00000410381 285 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 TMSB4XP6-201ENST00000415187 135 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC009302.1-201ENST00000417147 390 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 VPS26BP1-201ENST00000417155 755 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC010099.3-201ENST00000423896 409 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 TMSB4XP1-201ENST00000424567 135 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 HIGD1AP4-201ENST00000430194 280 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC016712.1-201ENST00000431088 378 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 MTCYBP31-201ENST00000438855 1122 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 ARL4AP1-201ENST00000503220 705 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 MTCYBP35-201ENST00000503630 1137 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC008494.2-201ENST00000514544 370 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 MTND2P38-201ENST00000522536 667 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AL137072.1-201ENST00000603444 466 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 RNF138P2-201ENST00000603490 592 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AP004247.3-201ENST00000608682 624 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC024257.5-201ENST00000612739 531 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 Z99129.2-201ENST00000619967 314 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AP002791.1-201ENST00000623291 381 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AL049737.1-201ENST00000413920 1403 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 KARSP3-201ENST00000571212 1504 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 AL034370.1-201ENST00000397254 1590 ntBASIC4.35□□□□□ -1.71
BEST3Q8N1M1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BEST3Q8N1M1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AL445437.1-201ENST00000623157 3087 ntBASIC4.34□□□□□ -1.71
BEST3Q8N1M1 AP001273.1-201ENST00000624493 3152 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms