Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AP005901.5-201ENST00000545779 1796 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 FAM3C2-201ENST00000312214 681 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL590084.2-201ENST00000401481 382 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL109941.1-201ENST00000401925 229 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 Z97832.1-201ENST00000402490 328 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL034374.1-201ENST00000406329 351 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 MIR1271-201ENST00000408537 86 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 Y_RNA.599-201ENST00000410489 109 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC092745.2-202ENST00000411880 369 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AP001324.1-201ENST00000428553 399 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 CACYBPP1-201ENST00000438592 684 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 MTCYBP34-201ENST00000439552 670 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ELOCP10-201ENST00000440624 327 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ARL5AP2-201ENST00000444698 533 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC073587.1-201ENST00000447093 876 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC005002.1-201ENST00000447458 540 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC104090.1-201ENST00000506341 1171 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 MTCO2P32-201ENST00000514865 403 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 RNU6-759P-201ENST00000516740 103 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 NMNAT1P1-201ENST00000554095 876 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC068446.3-201ENST00000555285 382 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC044913.1-201ENST00000557200 430 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 MIR4436B2-201ENST00000581415 91 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 MIR4436B1-201ENST00000583272 91 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC080078.2-201ENST00000603766 501 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ELOCP34-201ENST00000604436 327 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC022509.4-201ENST00000621404 572 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 AC007996.1-201ENST00000620414 2821 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 GTF2H2B-203ENST00000508065 1432 ntBASIC5.12□□□□□ -1.59
DKK3Q9UBP4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
DKK3Q9UBP4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 SCARNA15-201ENST00000607520 4325 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ADAM5-202ENST00000399789 1942 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RNU6-707P-201ENST00000364647 95 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RNA5SP455-201ENST00000365190 119 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 SNORA2.3-201ENST00000383920 135 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 SNORA66-201ENST00000384792 133 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RNU6-192P-201ENST00000391253 100 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 OR6K4P-201ENST00000423179 955 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.11□□□□□ -1.59
DKK3Q9UBP4 COX6CP13-201ENST00000428703 226 ntBASIC5.11□□□□□ -1.59
DKK3Q9UBP4 RBMY2QP-201ENST00000429799 1147 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms