Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC008565.1-201ENST00000509046 885 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC006499.6-201ENST00000511169 607 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 RN7SKP276-201ENST00000516242 268 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 NPM1P47-201ENST00000560843 856 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC009117.1-201ENST00000563948 554 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 MTATP6P24-201ENST00000576835 677 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL160290.3-201ENST00000604869 165 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL365400.2-201ENST00000605604 902 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC006963.1-201ENST00000624003 1052 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 MTCO1P6-201ENST00000481192 1384 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC068254.2-201ENST00000623938 3577 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 KPNA2P2-201ENST00000419546 1489 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC100871.1-201ENST00000507871 1456 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC108467.2-201ENST00000617640 1597 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 BX005019.1-201ENST00000561881 1810 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 RNU6-984P-201ENST00000363236 109 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 RNU6-178P-201ENST00000384631 104 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 MCTS2P-201ENST00000394552 546 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 MTCO1P56-201ENST00000401674 224 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 HSPD1P16-201ENST00000402302 394 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AP001324.1-201ENST00000428553 399 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 RPS24P8-201ENST00000431490 402 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC008072.1-201ENST00000434254 824 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 TPTE2P3-201ENST00000441562 1189 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC073648.4-201ENST00000442655 781 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 MTND1P33-201ENST00000446251 917 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC012671.1-201ENST00000451912 203 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC092324.1-201ENST00000468671 324 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 METTL15P1-201ENST00000481421 1045 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 IGLV2-34-201ENST00000490007 283 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC104108.1-201ENST00000509930 412 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 RNA5SP228-201ENST00000516232 133 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC068714.1-201ENST00000559623 800 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 CYP4A43P-201ENST00000568156 121 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 EIF1P6-201ENST00000600054 334 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL512782.1-201ENST00000603093 364 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL031320.1-201ENST00000604177 357 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC098935.2-201ENST00000604222 466 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL450336.1-201ENST00000605180 586 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 Z98200.1-201ENST00000607298 470 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL031666.3-201ENST00000609320 1006 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC015813.4-201ENST00000610469 179 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 uc_338.9-201ENST00000617424 182 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC009237.17-201ENST00000618111 748 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL121594.5-201ENST00000631724 573 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL356489.2-201ENST00000566968 3528 ntBASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A1Q8WWI5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A1Q8WWI5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A1Q8WWI5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SLC44A1Q8WWI5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SLC44A1Q8WWI5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms