Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.32□□□□□ -1.72
TPM1P09493 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.32□□□□□ -1.72
TPM1P09493 HSPE1P12-201ENST00000412576 301 ntBASIC4.32□□□□□ -1.72
TPM1P09493 AC007064.3-201ENST00000422608 359 ntBASIC4.32□□□□□ -1.72
TPM1P09493 BTF3P10-201ENST00000433415 495 ntBASIC4.32□□□□□ -1.72
TPM1P09493 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.32□□□□□ -1.72
TPM1P09493 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TPM1P09493 ACTR3P2-201ENST00000439585 1257 ntBASIC4.32□□□□□ -1.72
TPM1P09493 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 BUD31P2-201ENST00000449374 300 ntBASIC4.32□□□□□ -1.72
TPM1P09493 RPL7P24-201ENST00000493052 752 ntBASIC4.32□□□□□ -1.72
TPM1P09493 NDUFA5P12-201ENST00000503796 343 ntBASIC4.32□□□□□ -1.72
TPM1P09493 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.32□□□□□ -1.72
TPM1P09493 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM1P09493 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM1P09493 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM1P09493 AC027281.1-201ENST00000574178 758 ntBASIC4.32□□□□□ -1.72
TPM1P09493 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.32□□□□□ -1.72
TPM1P09493 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.32□□□□□ -1.72
TPM1P09493 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
TPM1P09493 AP000894.4-201ENST00000610185 483 ntBASIC4.32□□□□□ -1.72
TPM1P09493 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TPM1P09493 AC091905.1-201ENST00000624400 311 ntBASIC4.32□□□□□ -1.72
TPM1P09493 OR5AC4P-202ENST00000642086 985 ntBASIC4.32□□□□□ -1.72
TPM1P09493 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 MAPK10-372ENST00000641954 3413 ntBASIC4.32□□□□□ -1.72
TPM1P09493 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TPM1P09493 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TPM1P09493 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TPM1P09493 AC066616.2-201ENST00000559334 1481 ntBASIC4.31□□□□□ -1.72
TPM1P09493 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM1P09493 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.31□□□□□ -1.72
TPM1P09493 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TPM1P09493 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM1P09493 OR5AW1P-201ENST00000426334 1006 ntBASIC4.31□□□□□ -1.72
TPM1P09493 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM1P09493 HMGB3P5-201ENST00000428894 612 ntBASIC4.31□□□□□ -1.72
TPM1P09493 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.31□□□□□ -1.72
TPM1P09493 AL353093.1-201ENST00000441292 436 ntBASIC4.31□□□□□ -1.72
TPM1P09493 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM1P09493 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM1P09493 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM1P09493 AL136097.1-201ENST00000456945 913 ntBASIC4.31□□□□□ -1.72
TPM1P09493 RPL5P13-201ENST00000462840 709 ntBASIC4.31□□□□□ -1.72
TPM1P09493 RPL23AP12-201ENST00000467573 473 ntBASIC4.31□□□□□ -1.72
TPM1P09493 RN7SL860P-201ENST00000473738 223 ntBASIC4.31□□□□□ -1.72
TPM1P09493 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.31□□□□□ -1.72
TPM1P09493 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM1P09493 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM1P09493 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM1P09493 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM1P09493 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.31□□□□□ -1.72
TPM1P09493 AP001180.3-201ENST00000582221 145 ntBASIC4.31□□□□□ -1.72
TPM1P09493 BRDTP1-201ENST00000605735 677 ntBASIC4.31□□□□□ -1.72
TPM1P09493 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM1P09493 AC019193.2-201ENST00000610012 634 ntBASIC4.31□□□□□ -1.72
TPM1P09493 AL713922.2-201ENST00000619384 716 ntBASIC4.31□□□□□ -1.72
TPM1P09493 AP001784.1-201ENST00000624107 428 ntBASIC4.31□□□□□ -1.72
TPM1P09493 AC116563.2-201ENST00000624751 535 ntBASIC4.31□□□□□ -1.72
TPM1P09493 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.31□□□□□ -1.72
TPM1P09493 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.31□□□□□ -1.72
TPM1P09493 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TPM1P09493 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TPM1P09493 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TPM1P09493 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TPM1P09493 ASNSP1-204ENST00000641977 1664 ntBASIC4.3□□□□□ -1.72
TPM1P09493 OR4K17-201ENST00000315543 1032 ntBASIC4.3□□□□□ -1.72
TPM1P09493 RNA5SP447-201ENST00000363749 119 ntBASIC4.3□□□□□ -1.72
TPM1P09493 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.3□□□□□ -1.72
TPM1P09493 HSPE1P8-201ENST00000406997 288 ntBASIC4.3□□□□□ -1.72
TPM1P09493 AC009237.5-201ENST00000414271 501 ntBASIC4.3□□□□□ -1.72
TPM1P09493 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.3□□□□□ -1.72
TPM1P09493 AC108032.1-201ENST00000416706 207 ntBASIC4.3□□□□□ -1.72
TPM1P09493 RPL21P109-201ENST00000422213 475 ntBASIC4.3□□□□□ -1.72
TPM1P09493 AL772161.1-201ENST00000439130 476 ntBASIC4.3□□□□□ -1.72
TPM1P09493 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM1P09493 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM1P09493 RPL31P20-201ENST00000449593 360 ntBASIC4.3□□□□□ -1.72
TPM1P09493 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.3□□□□□ -1.72
TPM1P09493 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM1P09493 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM1P09493 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM1P09493 AC091516.1-201ENST00000549191 703 ntBASIC4.3□□□□□ -1.72
TPM1P09493 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM1P09493 PSMB7P1-201ENST00000556349 514 ntBASIC4.3□□□□□ -1.72
TPM1P09493 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TPM1P09493 AL133247.2-201ENST00000603236 482 ntBASIC4.3□□□□□ -1.72
TPM1P09493 AC115621.1-201ENST00000604653 858 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms