Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL1P09341 RPL36AP15-201ENST00000444514 266 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 VN1R96P-201ENST00000446052 858 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 CEACAMP6-201ENST00000452007 574 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC069277.2-201ENST00000454211 432 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC006539.3-201ENST00000454258 129 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 RNA5SP246-201ENST00000458909 119 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 RPS3AP41-201ENST00000462701 778 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 RPL12P20-201ENST00000475538 479 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 RPL23AP44-201ENST00000482216 473 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 RPL35P6-201ENST00000490024 372 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC021146.5-201ENST00000503544 545 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC093824.1-201ENST00000508796 343 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 KRT19P6-201ENST00000510983 209 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC105233.3-201ENST00000531125 744 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 OR5D15P-201ENST00000531671 942 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL1P09341 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL1P09341 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC008147.3-201ENST00000548666 354 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC037471.2-201ENST00000564941 598 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC083899.3-201ENST00000603413 594 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AL049844.2-201ENST00000604280 628 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AL451044.1-201ENST00000604867 238 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AC007423.1-201ENST00000605009 627 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.02□□□□□ -1.93
CXCL1P09341 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC018816.2-201ENST00000621460 353 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL1P09341 CFTRP2-201ENST00000634304 199 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.02□□□□□ -1.93
CXCL1P09341 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC017002.4-201ENST00000604721 1525 ntBASIC3.02□□□□□ -1.93
CXCL1P09341 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL1P09341 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL1P09341 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL1P09341 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL1P09341 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 AL513302.2-201ENST00000562313 1842 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 RPS7P13-201ENST00000413955 498 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 PTP4A1P5-201ENST00000420305 455 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL1P09341 AC244033.1-201ENST00000426826 870 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 FTH1P6-201ENST00000430768 320 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RPL23AP52-201ENST00000439311 478 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL1P09341 PHBP16-201ENST00000446318 950 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RPS17P13-201ENST00000448974 407 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RPS3AP53-201ENST00000454716 778 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 SNRPGP5-201ENST00000456003 220 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RPL7P32-201ENST00000457119 744 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RN7SL98P-201ENST00000462271 300 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RPL7P1-201ENST00000468161 747 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RPL7P9-201ENST00000468715 747 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RN7SL442P-201ENST00000473804 320 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RPS3AP50-201ENST00000487064 803 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 RN7SL810P-201ENST00000493031 276 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 AC106806.2-201ENST00000509365 500 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL1P09341 PHBP14-201ENST00000512887 367 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 NPM1P52-201ENST00000518264 846 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 AC093331.1-201ENST00000521474 169 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL1P09341 AC008489.1-201ENST00000524271 483 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 BRD9P1-201ENST00000529855 560 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL1P09341 AC090877.1-201ENST00000561418 344 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.01□□□□□ -1.93
CXCL1P09341 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.01□□□□□ -1.93
CXCL1P09341 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL1P09341 AC114878.2-201ENST00000604863 1251 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 AL445363.3-201ENST00000623080 671 ntBASIC3.01□□□□□ -1.93
CXCL1P09341 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL1P09341 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL1P09341 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL1P09341 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CXCL1P09341 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3□□□□□ -1.93
CXCL1P09341 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CXCL1P09341 AL645927.1-201ENST00000396783 406 ntBASIC3□□□□□ -1.93
CXCL1P09341 EI24P2-201ENST00000397776 1076 ntBASIC3□□□□□ -1.93
CXCL1P09341 AL136116.1-201ENST00000403591 381 ntBASIC3□□□□□ -1.93
CXCL1P09341 AMZ2P2-201ENST00000406819 1057 ntBASIC3□□□□□ -1.93
CXCL1P09341 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3□□□□□ -1.93
CXCL1P09341 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3□□□□□ -1.93
CXCL1P09341 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms