Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC096664.2-201ENST00000411843 406 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 PGBD4P8-201ENST00000412993 562 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 MTCO1P54-201ENST00000430139 712 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 MRPL50P1-201ENST00000431951 384 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 ELOCP8-201ENST00000439309 332 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 ELOCP15-201ENST00000442090 332 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC022336.1-201ENST00000475510 337 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC037471.2-201ENST00000564941 598 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AL354760.1-201ENST00000608357 643 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC024023.1-201ENST00000624530 922 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AL596275.2-204ENST00000641628 552 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AL596275.2-206ENST00000641957 626 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 RPSAP41-201ENST00000439695 860 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 SEPT14P1-201ENST00000458703 648 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 RN7SKP83-201ENST00000516512 178 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC007991.1-201ENST00000522680 631 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 AC022968.1-201ENST00000567372 442 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 CYP4A43P-201ENST00000568156 121 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 MIR8059-201ENST00000620427 81 ntBASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM3Q8TF72 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 SNORD35B-201ENST00000363660 87 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 SNORD74.4-201ENST00000364129 80 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 AC115285.1-201ENST00000424879 736 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 RPS26P28-201ENST00000470806 348 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 RN7SKP141-201ENST00000516167 338 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 RPL23AP87-202ENST00000573039 466 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 MIR4727-201ENST00000622232 55 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 AC026523.2-201ENST00000625039 7739 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 AL161912.2-201ENST00000565707 3007 ntBASIC4.1□□□□□ -1.75
SHROOM3Q8TF72 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 USP9YP4-201ENST00000424401 1745 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 SNORA3C-201ENST00000408792 125 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 HSPE1P27-201ENST00000430808 296 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AL035246.1-201ENST00000433554 1255 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 FABP3P2-201ENST00000453169 399 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AC110768.1-201ENST00000509222 400 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AC074250.1-201ENST00000511117 192 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 RN7SKP13-201ENST00000515933 244 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 RN7SKP157-201ENST00000516174 282 ntBASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SHROOM3Q8TF72 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 ATP5HP2-201ENST00000433885 485 ntBASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 AC007967.1-201ENST00000455422 1159 ntBASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.09□□□□□ -1.76
SHROOM3Q8TF72 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms